Protein NMR

A Practical Guide

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  • Introduction
  • Solution NMR
    • Assignment Theory
      • Visualising 3D Spectra
      • Triple Resonance Backbone Assignment
      • Triple Resonance Side-chain Assignment
      • Double Resonance Backbone Assignment
      • Double Resonance Side-chain Assignment
    • Assignment Practice
      • Initialising the HSQC
      • Peakpicking the 3D Spectra
      • Triple Resonance Backbone Assignment
        • Manual Assignment
        • Semi-automated Assignment
        • Sequence-Specific Assignment
        • Using HNCA/HNCO Spectra
      • Double Resonance Backbone Assignment
        • Neighbouring Residues
        • Directionality
        • Matching Peaks
        • Lining Up Strips
        • Sequence-Specific Assignment
      • Hints and Tips
    • Spectrum Descriptions
      • 1H-15N HSQC
      • HNCO
      • HN(CA)CO
      • HNCA
      • HN(CO)CA
      • CBCA(CO)NH / HN(CO)CACB
      • CBCANH / HNCACB
      • CC(CO)NH
      • H(CCO)NH
      • HBHA(CO)NH
      • HCCH-TOCSY
      • HCCH-COSY
      • 15N-TOCSY-HSQC
      • 13C-HMQC
      • H-H NOESY
      • 15N-NOESY-HSQC
      • 13C-NOESY-HSQC
      • 13C-HMQC-NOESY
  • Solid-State MAS NMR
    • Solid-state Assignment Tutorial
    • CCPNmr Analysis Solid-state Tips
    • Spectrum Descriptions
      • PDSD
      • DARR
      • NCA
      • NCO
      • NCACX
      • NCOCX
      • NCACB
      • CANCO
      • CANCOCX
      • CHHC
      • NHHC
  • General NMR
    • Chemical Shifts
      • Basics
      • Chemical Shift Anisotropy
      • Chemical Exchange
      • Chemical Shift Mapping
      • Random Coil Chemical Shifts
      • Secondary Structure
      • Structure Calculation
      • Chemical Shift Prediction
    • Isotopic Labelling
      • 15N
      • 15N,13C
      • 15N,13C,2H
      • IVL side-chain methyl groups
      • SAIL (Stereo-Array Isotope Labelling)
      • 1,3-13C- and 2-13C-Glycerol
      • Amino Acid Specific
      • Cell-free
      • Segmental
      • Other Labelling Schemes
    • Literature
    • Software
      • Processing
      • Assignment
      • Automatic Assignment
      • Structure Calculation
      • Molecular Viewers
      • Validation
      • Chemical Shift Analysis
      • RDC Analysis
      • Analysis of Dynamics Data
      • Pulse Sequence Simulation
      • Lab Software Pages
    • NMR Links
    • Glossary / Abbreviations
  • CCPNmr Analysis
    • Version 1.0 Basics
      • New Project
      • Molecules
      • Reading in Spectra
      • Windows and Axes
      • Spectrum Attributes
      • Navigation
      • Mouse Usage
      • Marks and Rulers
      • Peakpicking
      • Resonances and Spin Systems
      • Assignment of Peaks
      • Peak Lists
      • Strips
      • Tables
      • Keyboard Shortcuts
    • Version 2.x Basics
      • New Project
      • Molecules
      • Reading in Spectra
      • Windows and Axes
      • Spectrum Attributes
      • Navigation
      • Mouse Usage
      • Marks and Rulers
      • Peakpicking
      • Resonances and Spin Systems
      • Assignment of Peaks
      • Peak Lists
      • Strips
      • Tables
      • Keyboard Shortcuts
    • CCPNmr Analysis Solid-state Tips
      • Experiment Types
      • Overlaying Spectra
      • Double Cross-hair Mouse
      • Organising Windows and Spectra
      • Strips and Separators
      • Making Strip Plots
      • Tolerances
      • 1D Spectra
      • Assignments
      • Tentative Assignments
      • Identifying Side-band Peaks
      • Marking Side-band Peaks
      • Double-Quantum Axes
      • Labelling Schemes
      • Editing Labelling Schemes
      • Distance Restraints
    • Figures with CCPNmr Analysis
  • Contact

Lab Software Pages

Over the years, several NMR Labs have developed numerous software packages (and will no doubt continue to develop more in the future). It would not be possible to list every single NMR-related computer program on this web page, so here are links to the software pages of many of the labs engaged this kind of work.

Bax Group
Griffin Group
IBS Grenoble
Palmer Group
Prestegard Group
Vendruscolo Group
Wishart Group
Zweckstetter Group
<< Previous: Pulse Sequence Simulation

Content

  • Introduction
  • Solution NMR
  • Solid-State MAS NMR
  • General NMR
    • Chemical Shifts
    • Isotopic Labelling
    • Literature
    • Software
      • Processing
      • Assignment
      • Automatic Assignment
      • Structure Calculation
      • Molecular Viewers
      • Validation
      • Chemical Shift Analysis
      • RDC Analysis
      • Analysis of Dynamics Data
      • Pulse Sequence Simulation
      • Lab Software Pages
    • NMR Links
    • Glossary / Abbreviations
  • CCPNmr Analysis
  • Contact
by Victoria A. Higman, last modified on 22 October 2012